PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS61898.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family CAMTA
Protein Properties Length: 145aa    MW: 17069.5 Da    PI: 9.4261
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS61898.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1158.71.1e-49241384117
        CG-1   4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywl 101
                 e + rwlk+ e+  iL+n +  +l+++ +++p+ gsl+Lyn+++++ frkDG+sw+k+ d +t rE+he+LKvg+ve+l+cyYah+eenp++ rrc+w+
  EPS61898.1  24 EaQIRWLKPPEVFFILQNCNDQQLSSNVPHKPPGGSLFLYNKRVLKSFRKDGHSWRKRTDQRTAREAHERLKVGNVEALSCYYAHGEENPNLCRRCFWM 122
                 5588*********************************************************************************************** PP

        CG-1 102 Leeelekivlvhylev 117
                 L+ ++e+ivlv+y+ev
  EPS61898.1 123 LDPAYEHIVLVQYREV 138
                 **************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143767.85918144IPR005559CG-1 DNA-binding domain
SMARTSM010769.7E-6021139IPR005559CG-1 DNA-binding domain
PfamPF038591.5E-4424137IPR005559CG-1 DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    Send to blast
GFVVFVTSFR FMESGYDLAQ LAREAQIRWL KPPEVFFILQ NCNDQQLSSN VPHKPPGGSL  60
FLYNKRVLKS FRKDGHSWRK RTDQRTAREA HERLKVGNVE ALSCYYAHGE ENPNLCRRCF  120
WMLDPAYEHI VLVQYREVVQ GYLKT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011086818.18e-62PREDICTED: calmodulin-binding transcription activator 4
SwissprotQ9FYG23e-51CMTA4_ARATH; Calmodulin-binding transcription activator 4
TrEMBLS8DGK01e-107S8DGK0_9LAMI; Uncharacterized protein (Fragment)
STRINGSolyc05g015650.2.11e-60(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14489811
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.12e-52Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]